Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
COMMD3-BMI1R4GMX3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 AC027702.1-201ENST00000563810 1770 ntBASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
COMMD3-BMI1R4GMX3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 AC020907.5-201ENST00000624372 1936 ntBASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
COMMD3-BMI1R4GMX3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 SRD5A1P1-201ENST00000442297 786 ntBASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 MIR3181-201ENST00000578512 73 ntBASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
COMMD3-BMI1R4GMX3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 AC005332.8-201ENST00000622750 2735 ntBASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 AL512631.2-201ENST00000604634 923 ntBASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.17■□□□□ 0.66
COMMD3-BMI1R4GMX3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 AC079089.2-201ENST00000531211 1277 ntBASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3-BMI1R4GMX3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms