Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DNMT3AQ9Y6K1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 AL589743.5-201ENST00000616611 1050 ntBASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DNMT3AQ9Y6K1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 LSM12P1-201ENST00000411836 588 ntBASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DNMT3AQ9Y6K1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 AL355802.2-201ENST00000402069 882 ntBASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 AL355472.2-201ENST00000422958 438 ntBASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 AL138781.1-201ENST00000566567 1274 ntBASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
DNMT3AQ9Y6K1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 AC069152.1-201ENST00000438030 544 ntBASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 MIR2861-201ENST00000636310 90 ntBASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DNMT3AQ9Y6K1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 AF106564.1-201ENST00000607058 2553 ntBASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
DNMT3AQ9Y6K1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms