Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC6Q9Y625 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC6Q9Y625 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC6Q9Y625 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
GPC6Q9Y625 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC6Q9Y625 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
GPC6Q9Y625 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
GPC6Q9Y625 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC6Q9Y625 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 AC026471.1-201ENST00000564629 3026 ntBASIC19.31■□□□□ 0.68
GPC6Q9Y625 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
GPC6Q9Y625 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC6Q9Y625 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC6Q9Y625 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 TERF1P2-201ENST00000583350 1212 ntBASIC19.31■□□□□ 0.68
GPC6Q9Y625 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
GPC6Q9Y625 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
GPC6Q9Y625 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GPC6Q9Y625 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 AC097381.1-201ENST00000429019 1296 ntBASIC19.3■□□□□ 0.68
GPC6Q9Y625 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
GPC6Q9Y625 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
GPC6Q9Y625 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 GABARAPL3-202ENST00000624044 1851 ntBASIC19.29■□□□□ 0.68
GPC6Q9Y625 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 AC079140.4-201ENST00000507448 529 ntBASIC19.29■□□□□ 0.68
GPC6Q9Y625 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 MIR6821-201ENST00000617625 74 ntBASIC19.29■□□□□ 0.68
GPC6Q9Y625 AP005212.1-201ENST00000581547 1997 ntBASIC19.29■□□□□ 0.68
GPC6Q9Y625 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC6Q9Y625 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC6Q9Y625 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.28■□□□□ 0.68
GPC6Q9Y625 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
GPC6Q9Y625 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.28■□□□□ 0.68
GPC6Q9Y625 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 CCDC92B-201ENST00000575506 885 ntBASIC19.28■□□□□ 0.68
GPC6Q9Y625 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.28■□□□□ 0.68
GPC6Q9Y625 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC6Q9Y625 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GPC6Q9Y625 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
GPC6Q9Y625 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC6Q9Y625 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC6Q9Y625 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms