Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC243732.1-201ENST00000612648 864 ntBASIC19.4■□□□□ 0.7
LHX6Q9UPM6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LHX6Q9UPM6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 DUX4L26-201ENST00000489078 1255 ntBASIC19.39■□□□□ 0.69
LHX6Q9UPM6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 AL024507.2-201ENST00000606070 2574 ntBASIC19.39■□□□□ 0.69
LHX6Q9UPM6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LHX6Q9UPM6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 KRASP1-201ENST00000407852 552 ntBASIC19.38■□□□□ 0.69
LHX6Q9UPM6 AL355355.2-201ENST00000442321 338 ntBASIC19.38■□□□□ 0.69
LHX6Q9UPM6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.38■□□□□ 0.69
LHX6Q9UPM6 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 AL137013.1-201ENST00000432946 1228 ntBASIC19.37■□□□□ 0.69
LHX6Q9UPM6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 KRT18P56-201ENST00000507275 550 ntBASIC19.37■□□□□ 0.69
LHX6Q9UPM6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LHX6Q9UPM6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 KRT16P2-201ENST00000414673 1423 ntBASIC19.36■□□□□ 0.69
LHX6Q9UPM6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 AC100791.3-201ENST00000617619 330 ntBASIC19.36■□□□□ 0.69
LHX6Q9UPM6 AC006557.6-201ENST00000623071 864 ntBASIC19.36■□□□□ 0.69
LHX6Q9UPM6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX6Q9UPM6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LHX6Q9UPM6 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.35■□□□□ 0.69
LHX6Q9UPM6 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms