Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 SLC7A5P1-201ENST00000568957 537 ntBASIC19.81■□□□□ 0.76
SNX6Q9UNH7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SNX6Q9UNH7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 AC243732.1-201ENST00000612648 864 ntBASIC19.8■□□□□ 0.76
SNX6Q9UNH7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SNX6Q9UNH7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX6Q9UNH7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX6Q9UNH7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX6Q9UNH7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SNX6Q9UNH7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNX6Q9UNH7 RBM17P2-201ENST00000616397 1405 ntBASIC19.76■□□□□ 0.75
SNX6Q9UNH7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms