Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VAPAQ9P0L0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
VAPAQ9P0L0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VAPAQ9P0L0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 AC008175.2-201ENST00000612840 297 ntBASIC19.39■□□□□ 0.69
VAPAQ9P0L0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 TCF3P1-201ENST00000423021 1937 ntBASIC19.39■□□□□ 0.69
VAPAQ9P0L0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VAPAQ9P0L0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.38■□□□□ 0.69
VAPAQ9P0L0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 AL354811.1-201ENST00000610286 706 ntBASIC19.38■□□□□ 0.69
VAPAQ9P0L0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.38■□□□□ 0.69
VAPAQ9P0L0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VAPAQ9P0L0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VAPAQ9P0L0 KRT87P-202ENST00000534226 1464 ntBASIC19.35■□□□□ 0.69
VAPAQ9P0L0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VAPAQ9P0L0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 AC079140.4-201ENST00000507448 529 ntBASIC19.34■□□□□ 0.69
VAPAQ9P0L0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VAPAQ9P0L0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms