Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.83■□□□□ 0.76
CUEDC1Q9NWM3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 AC006128.1-201ENST00000624704 1661 ntBASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CUEDC1Q9NWM3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 AC142086.2-201ENST00000569753 217 ntBASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CUEDC1Q9NWM3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 AL162412.1-201ENST00000567129 965 ntBASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 FAM21FP-204ENST00000608637 956 ntBASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.8■□□□□ 0.76
CUEDC1Q9NWM3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 RARRES2P4-201ENST00000514074 484 ntBASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CUEDC1Q9NWM3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.78■□□□□ 0.76
CUEDC1Q9NWM3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms