Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.83■■□□□ 1.41
RBM28Q9NW13 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RBM28Q9NW13 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RBM28Q9NW13 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC23.83■■□□□ 1.41
RBM28Q9NW13 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
RBM28Q9NW13 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
RBM28Q9NW13 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 AC007225.1-201ENST00000566331 1836 ntBASIC23.82■■□□□ 1.4
RBM28Q9NW13 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 PGM5P4-201ENST00000421970 445 ntBASIC23.82■■□□□ 1.4
RBM28Q9NW13 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC23.82■■□□□ 1.4
RBM28Q9NW13 AC093787.1-201ENST00000450396 207 ntBASIC23.82■■□□□ 1.4
RBM28Q9NW13 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.82■■□□□ 1.4
RBM28Q9NW13 AL121832.2-201ENST00000610979 668 ntBASIC23.82■■□□□ 1.4
RBM28Q9NW13 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 AC087633.2-202ENST00000565166 1439 ntBASIC23.82■■□□□ 1.4
RBM28Q9NW13 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RBM28Q9NW13 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RBM28Q9NW13 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
RBM28Q9NW13 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RBM28Q9NW13 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RBM28Q9NW13 AC010980.2-201ENST00000587099 1412 ntBASIC23.81■■□□□ 1.4
RBM28Q9NW13 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.81■■□□□ 1.4
RBM28Q9NW13 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RBM28Q9NW13 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.81■■□□□ 1.4
RBM28Q9NW13 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RBM28Q9NW13 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RBM28Q9NW13 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.8■■□□□ 1.4
RBM28Q9NW13 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
RBM28Q9NW13 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RBM28Q9NW13 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.8■■□□□ 1.4
RBM28Q9NW13 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.8■■□□□ 1.4
RBM28Q9NW13 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.8■■□□□ 1.4
RBM28Q9NW13 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.8■■□□□ 1.4
RBM28Q9NW13 AC105036.2-201ENST00000569468 176 ntBASIC23.8■■□□□ 1.4
RBM28Q9NW13 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.8■■□□□ 1.4
RBM28Q9NW13 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RBM28Q9NW13 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RBM28Q9NW13 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RBM28Q9NW13 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBM28Q9NW13 FP700111.2-201ENST00000619190 1892 ntBASIC23.79■■□□□ 1.4
RBM28Q9NW13 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBM28Q9NW13 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBM28Q9NW13 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 NCF1B-203ENST00000435988 1254 ntBASIC23.79■■□□□ 1.4
RBM28Q9NW13 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBM28Q9NW13 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBM28Q9NW13 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.79■■□□□ 1.4
RBM28Q9NW13 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RBM28Q9NW13 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC23.78■■□□□ 1.4
RBM28Q9NW13 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.78■■□□□ 1.4
RBM28Q9NW13 AC083906.2-201ENST00000511578 360 ntBASIC23.78■■□□□ 1.4
RBM28Q9NW13 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC23.78■■□□□ 1.4
RBM28Q9NW13 CYP2T3P-201ENST00000601990 817 ntBASIC23.78■■□□□ 1.4
RBM28Q9NW13 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
RBM28Q9NW13 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
RBM28Q9NW13 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RBM28Q9NW13 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RBM28Q9NW13 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RBM28Q9NW13 MAP2K4P1-201ENST00000438453 1195 ntBASIC23.77■■□□□ 1.4
RBM28Q9NW13 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.77■■□□□ 1.4
RBM28Q9NW13 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
RBM28Q9NW13 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RBM28Q9NW13 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
RBM28Q9NW13 BID-203ENST00000399765 1879 ntTSL 2 BASIC23.77■■□□□ 1.4
RBM28Q9NW13 KRT8P36-201ENST00000489121 1440 ntBASIC23.76■■□□□ 1.39
RBM28Q9NW13 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RBM28Q9NW13 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
RBM28Q9NW13 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RBM28Q9NW13 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
RBM28Q9NW13 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RBM28Q9NW13 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.76■■□□□ 1.39
RBM28Q9NW13 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.76■■□□□ 1.39
RBM28Q9NW13 MKRN4P-201ENST00000444706 1521 ntBASIC23.76■■□□□ 1.39
RBM28Q9NW13 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC23.76■■□□□ 1.39
RBM28Q9NW13 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC23.76■■□□□ 1.39
RBM28Q9NW13 GPX1P1-201ENST00000388829 606 ntBASIC23.76■■□□□ 1.39
RBM28Q9NW13 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.76■■□□□ 1.39
RBM28Q9NW13 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RBM28Q9NW13 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms