Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM106BQ9NUM4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM106BQ9NUM4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM106BQ9NUM4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM106BQ9NUM4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM106BQ9NUM4 FEM1AP4-201ENST00000443167 1987 ntBASIC17.35■□□□□ 0.37
TMEM106BQ9NUM4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM106BQ9NUM4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 AL138781.1-201ENST00000566567 1274 ntBASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM106BQ9NUM4 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TMEM106BQ9NUM4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 BX276092.2-201ENST00000417668 665 ntBASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 MIR4758-201ENST00000577688 71 ntBASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM106BQ9NUM4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 MCRIP2P1-201ENST00000394346 511 ntBASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 AC133041.1-202ENST00000642053 222 ntBASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM106BQ9NUM4 AC011484.1-201ENST00000377652 1995 ntBASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 CYP2T3P-201ENST00000601990 817 ntBASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMEM106BQ9NUM4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM106BQ9NUM4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMEM106BQ9NUM4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms