Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 H19-210ENST00000439725 1929 ntTSL 2 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
CDC42SE1Q9NRR8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 AC008894.3-201ENST00000624324 3103 ntBASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.62□□□□□ -0.71
CDC42SE1Q9NRR8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 AL138781.2-201ENST00000617896 1843 ntBASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 AC073314.1-201ENST00000568729 2216 ntBASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
CDC42SE1Q9NRR8 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
CDC42SE1Q9NRR8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms