Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBQLN4Q9NRR5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 FP700111.2-201ENST00000619190 1892 ntBASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 AC004911.1-201ENST00000416316 871 ntBASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 AC007322.1-201ENST00000426983 750 ntBASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.86■□□□□ 0.61
UBQLN4Q9NRR5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 AC068338.2-201ENST00000563278 1430 ntBASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 AC080038.1-201ENST00000611274 1154 ntBASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.85■□□□□ 0.61
UBQLN4Q9NRR5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
UBQLN4Q9NRR5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBQLN4Q9NRR5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 AC016405.3-201ENST00000607710 860 ntBASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 MIR2861-201ENST00000636310 90 ntBASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBQLN4Q9NRR5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms