Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.11■■□□□ 1.29
PDLIM7Q9NR12 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 AL589743.5-201ENST00000616611 1050 ntBASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 LINC00565-201ENST00000562710 2331 ntBASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.1■■□□□ 1.29
PDLIM7Q9NR12 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 SLC29A4P2-201ENST00000504749 1089 ntBASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 SOX15-203ENST00000570788 1093 ntBASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.09■■□□□ 1.29
PDLIM7Q9NR12 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 Z98882.1-201ENST00000622160 2253 ntBASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PDLIM7Q9NR12 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDLIM7Q9NR12 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PDLIM7Q9NR12 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PDLIM7Q9NR12 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 AC245052.3-201ENST00000450182 901 ntBASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 OR2A1-AS1-207ENST00000486094 819 ntBASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PDLIM7Q9NR12 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 AC012618.2-201ENST00000428058 849 ntBASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PDLIM7Q9NR12 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 AC233702.5-201ENST00000584107 538 ntBASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.05■■□□□ 1.28
PDLIM7Q9NR12 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms