Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS4Q9NQG7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.23■□□□□ 0.99
HPS4Q9NQG7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
HPS4Q9NQG7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.22■□□□□ 0.99
HPS4Q9NQG7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 PKD1P6-201ENST00000343738 4769 ntBASIC21.21■□□□□ 0.99
HPS4Q9NQG7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 AC105020.6-201ENST00000621523 1217 ntBASIC21.21■□□□□ 0.99
HPS4Q9NQG7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
HPS4Q9NQG7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HPS4Q9NQG7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
HPS4Q9NQG7 AC116050.2-201ENST00000612102 1779 ntBASIC21.2■□□□□ 0.99
HPS4Q9NQG7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.2■□□□□ 0.98
HPS4Q9NQG7 AC233263.1-201ENST00000578059 224 ntBASIC21.2■□□□□ 0.98
HPS4Q9NQG7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms