Protein–RNA interactions for Protein: Q9NPG4

PCDH12, Protocadherin-12, humanhuman

Predictions only

Length 1,184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12Q9NPG4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 AL049796.1-201ENST00000565336 1766 ntBASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH12Q9NPG4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 AC092118.2-201ENST00000613495 667 ntBASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 AC133041.1-202ENST00000642053 222 ntBASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH12Q9NPG4 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
PCDH12Q9NPG4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
PCDH12Q9NPG4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 MCRIP2P1-201ENST00000394346 511 ntBASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 AC073210.2-201ENST00000430369 194 ntBASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 CYP2T3P-201ENST00000601990 817 ntBASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PCDH12Q9NPG4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 AF106564.1-201ENST00000607058 2553 ntBASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 AC026310.3-201ENST00000625186 2373 ntBASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 KRT17P1-201ENST00000399211 1546 ntBASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH12Q9NPG4 CYP21A1P-202ENST00000354927 1481 ntBASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
PCDH12Q9NPG4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH12Q9NPG4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH12Q9NPG4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms