Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
GCM1Q9NP62 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.5■□□□□ 0.39
GCM1Q9NP62 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.5■□□□□ 0.39
GCM1Q9NP62 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.5■□□□□ 0.39
GCM1Q9NP62 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
GCM1Q9NP62 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
GCM1Q9NP62 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
GCM1Q9NP62 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
GCM1Q9NP62 AF106564.1-201ENST00000607058 2553 ntBASIC17.49■□□□□ 0.39
GCM1Q9NP62 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
GCM1Q9NP62 AIRN-201ENST00000601203 4374 ntBASIC17.49■□□□□ 0.39
GCM1Q9NP62 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCM1Q9NP62 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.49■□□□□ 0.39
GCM1Q9NP62 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCM1Q9NP62 CYP2T1P-201ENST00000432607 1285 ntBASIC17.49■□□□□ 0.39
GCM1Q9NP62 CDV3P1-201ENST00000471403 739 ntBASIC17.49■□□□□ 0.39
GCM1Q9NP62 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.49■□□□□ 0.39
GCM1Q9NP62 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.49■□□□□ 0.39
GCM1Q9NP62 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
GCM1Q9NP62 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
GCM1Q9NP62 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCM1Q9NP62 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
GCM1Q9NP62 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 AC116050.2-201ENST00000612102 1779 ntBASIC17.48■□□□□ 0.39
GCM1Q9NP62 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 AL050303.2-201ENST00000619798 666 ntBASIC17.48■□□□□ 0.39
GCM1Q9NP62 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
GCM1Q9NP62 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.48■□□□□ 0.39
GCM1Q9NP62 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 AC069236.1-201ENST00000604339 616 ntBASIC17.47■□□□□ 0.39
GCM1Q9NP62 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 AC008694.1-202ENST00000636953 945 ntBASIC17.47■□□□□ 0.39
GCM1Q9NP62 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
GCM1Q9NP62 AC007375.3-201ENST00000600936 2314 ntBASIC17.47■□□□□ 0.39
GCM1Q9NP62 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GCM1Q9NP62 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 AC007322.3-201ENST00000426526 701 ntBASIC17.46■□□□□ 0.39
GCM1Q9NP62 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 AC133552.2-202ENST00000575694 574 ntBASIC17.46■□□□□ 0.39
GCM1Q9NP62 AC016405.3-201ENST00000607710 860 ntBASIC17.46■□□□□ 0.39
GCM1Q9NP62 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.46■□□□□ 0.39
GCM1Q9NP62 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GCM1Q9NP62 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
GCM1Q9NP62 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms