Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 VN1R66P-201ENST00000412929 916 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 SSR1P2-201ENST00000415208 787 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 BX005214.2-201ENST00000423499 1077 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 MTND4LP13-201ENST00000425022 298 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL591212.2-201ENST00000433923 257 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC098614.3-201ENST00000438957 440 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 MTND5P2-201ENST00000442927 1142 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 UBE2V1P7-201ENST00000446395 340 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 RPS2P7-201ENST00000447334 885 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 LINC02561-201ENST00000449457 692 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 RPS3AP53-201ENST00000454716 778 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL583824.1-203ENST00000457948 761 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC008565.1-201ENST00000509046 885 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 BMS1P16-201ENST00000556075 1147 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC063923.2-201ENST00000562158 928 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 GRAMD4P7-201ENST00000578182 1232 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC005954.2-201ENST00000586503 556 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 GMFG-210ENST00000601387 497 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL049840.6-202ENST00000603373 279 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC013731.1-201ENST00000604340 883 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC124312.5-201ENST00000604451 268 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AP003973.1-201ENST00000604639 691 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AP000942.4-201ENST00000604811 241 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 KATNBL1P5-201ENST00000605015 517 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 FAM72A-208ENST00000607379 1139 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC091965.4-201ENST00000607691 587 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 UBXN8-207ENST00000615729 702 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC022400.7-201ENST00000625041 1236 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AL121749.1-202ENST00000609313 2153 ntBASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 AC011525.2-202ENST00000590611 1657 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 RSRC1-202ENST00000312179 1443 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 COMMD6-205ENST00000406936 1628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KRTAP4-4Q9BYR3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
KRTAP4-4Q9BYR3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 AL132656.3-201ENST00000606384 1595 ntBASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 AC046158.4-201ENST00000623121 1347 ntBASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 AC142472.1-201ENST00000612013 1741 ntBASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRTAP4-4Q9BYR3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms