Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.24□□□□□ -0.13
UPK3BQ9BT76 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.23□□□□□ -0.13
UPK3BQ9BT76 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CASP6-205ENST00000505486 538 ntTSL 4 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 LSR-203ENST00000360798 1963 ntTSL 2 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 AL137060.1-201ENST00000618151 2648 ntBASIC14.23□□□□□ -0.13
UPK3BQ9BT76 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
UPK3BQ9BT76 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 MIR4758-201ENST00000577688 71 ntBASIC14.22□□□□□ -0.13
UPK3BQ9BT76 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 AC100791.3-201ENST00000617619 330 ntBASIC14.22□□□□□ -0.13
UPK3BQ9BT76 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 AC133041.1-202ENST00000642053 222 ntBASIC14.22□□□□□ -0.13
UPK3BQ9BT76 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
UPK3BQ9BT76 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 AC016405.3-201ENST00000607710 860 ntBASIC14.21□□□□□ -0.13
UPK3BQ9BT76 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.21□□□□□ -0.13
UPK3BQ9BT76 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
UPK3BQ9BT76 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 AC069152.1-201ENST00000438030 544 ntBASIC14.2□□□□□ -0.14
UPK3BQ9BT76 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.2□□□□□ -0.14
UPK3BQ9BT76 AC092118.2-201ENST00000613495 667 ntBASIC14.2□□□□□ -0.14
UPK3BQ9BT76 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms