Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 AP004607.4-201ENST00000530158 1459 ntBASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 AL137784.2-201ENST00000607332 1000 ntBASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 OR7E47P-201ENST00000546390 1422 ntBASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 AC004854.2-201ENST00000608450 1441 ntBASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TUBA1CQ9BQE3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 AC079140.4-201ENST00000507448 529 ntBASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TUBA1CQ9BQE3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.29■□□□□ 0.68
TUBA1CQ9BQE3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 AP004607.7-201ENST00000527152 1677 ntBASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 AC004911.1-201ENST00000416316 871 ntBASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TUBA1CQ9BQE3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TUBA1CQ9BQE3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
TUBA1CQ9BQE3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.27■□□□□ 0.67
TUBA1CQ9BQE3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.26■□□□□ 0.67
TUBA1CQ9BQE3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms