Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PKP2Q99959 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP2Q99959 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP2Q99959 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PKP2Q99959 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP2Q99959 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PKP2Q99959 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP2Q99959 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PKP2Q99959 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 BX005040.4-201ENST00000637145 1518 ntBASIC19.27■□□□□ 0.68
PKP2Q99959 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.27■□□□□ 0.68
PKP2Q99959 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.27■□□□□ 0.68
PKP2Q99959 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.27■□□□□ 0.68
PKP2Q99959 MIR3181-201ENST00000578512 73 ntBASIC19.27■□□□□ 0.68
PKP2Q99959 AC010997.5-201ENST00000609182 354 ntBASIC19.27■□□□□ 0.68
PKP2Q99959 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.27■□□□□ 0.68
PKP2Q99959 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PKP2Q99959 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.27■□□□□ 0.67
PKP2Q99959 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PKP2Q99959 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PKP2Q99959 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PKP2Q99959 AC005332.7-201ENST00000614046 2005 ntBASIC19.27■□□□□ 0.67
PKP2Q99959 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PKP2Q99959 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PKP2Q99959 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PKP2Q99959 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.26■□□□□ 0.67
PKP2Q99959 AC099791.2-201ENST00000605725 427 ntBASIC19.26■□□□□ 0.67
PKP2Q99959 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PKP2Q99959 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.26■□□□□ 0.67
PKP2Q99959 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PKP2Q99959 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PKP2Q99959 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PKP2Q99959 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP2Q99959 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP2Q99959 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PKP2Q99959 AC011484.1-201ENST00000377652 1995 ntBASIC19.25■□□□□ 0.67
PKP2Q99959 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PKP2Q99959 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.25■□□□□ 0.67
PKP2Q99959 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PKP2Q99959 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP2Q99959 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKP2Q99959 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.25■□□□□ 0.67
PKP2Q99959 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PKP2Q99959 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP2Q99959 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.25■□□□□ 0.67
PKP2Q99959 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP2Q99959 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.24■□□□□ 0.67
PKP2Q99959 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.24■□□□□ 0.67
PKP2Q99959 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PKP2Q99959 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PKP2Q99959 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.24■□□□□ 0.67
PKP2Q99959 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.24■□□□□ 0.67
PKP2Q99959 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PKP2Q99959 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PKP2Q99959 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKP2Q99959 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.24■□□□□ 0.67
PKP2Q99959 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP2Q99959 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP2Q99959 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.23■□□□□ 0.67
PKP2Q99959 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKP2Q99959 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms