Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SMR3AQ99954 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMR3AQ99954 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMR3AQ99954 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMR3AQ99954 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMR3AQ99954 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMR3AQ99954 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMR3AQ99954 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMR3AQ99954 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMR3AQ99954 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMR3AQ99954 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.83■□□□□ 0.28
SMR3AQ99954 KRT18P22-201ENST00000402024 1347 ntBASIC16.83■□□□□ 0.28
SMR3AQ99954 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.83■□□□□ 0.28
SMR3AQ99954 SLC25A3P1-201ENST00000443844 931 ntBASIC16.83■□□□□ 0.28
SMR3AQ99954 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.83■□□□□ 0.28
SMR3AQ99954 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.83■□□□□ 0.28
SMR3AQ99954 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.83■□□□□ 0.28
SMR3AQ99954 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMR3AQ99954 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.83■□□□□ 0.28
SMR3AQ99954 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.83■□□□□ 0.28
SMR3AQ99954 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SMR3AQ99954 NAPSB-206ENST00000562112 1266 ntBASIC16.83■□□□□ 0.28
SMR3AQ99954 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMR3AQ99954 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.82■□□□□ 0.28
SMR3AQ99954 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.82■□□□□ 0.28
SMR3AQ99954 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.82■□□□□ 0.28
SMR3AQ99954 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SMR3AQ99954 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMR3AQ99954 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.82■□□□□ 0.28
SMR3AQ99954 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.82■□□□□ 0.28
SMR3AQ99954 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.82■□□□□ 0.28
SMR3AQ99954 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.82■□□□□ 0.28
SMR3AQ99954 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.82■□□□□ 0.28
SMR3AQ99954 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.82■□□□□ 0.28
SMR3AQ99954 AC010947.1-201ENST00000623454 693 ntBASIC16.82■□□□□ 0.28
SMR3AQ99954 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMR3AQ99954 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SMR3AQ99954 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SMR3AQ99954 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.81■□□□□ 0.28
SMR3AQ99954 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.81■□□□□ 0.28
SMR3AQ99954 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.81■□□□□ 0.28
SMR3AQ99954 NUDT16P1-203ENST00000513809 620 ntBASIC16.81■□□□□ 0.28
SMR3AQ99954 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.81■□□□□ 0.28
SMR3AQ99954 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SMR3AQ99954 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SMR3AQ99954 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.81■□□□□ 0.28
SMR3AQ99954 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SMR3AQ99954 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.81■□□□□ 0.28
SMR3AQ99954 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SMR3AQ99954 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16.81■□□□□ 0.28
SMR3AQ99954 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMR3AQ99954 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMR3AQ99954 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.8■□□□□ 0.28
SMR3AQ99954 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.8■□□□□ 0.28
SMR3AQ99954 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMR3AQ99954 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.8■□□□□ 0.28
SMR3AQ99954 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SMR3AQ99954 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMR3AQ99954 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.8■□□□□ 0.28
SMR3AQ99954 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SMR3AQ99954 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMR3AQ99954 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.8■□□□□ 0.28
SMR3AQ99954 AC010203.1-204ENST00000548782 407 ntBASIC16.8■□□□□ 0.28
SMR3AQ99954 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.8■□□□□ 0.28
SMR3AQ99954 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.8■□□□□ 0.28
SMR3AQ99954 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.8■□□□□ 0.28
SMR3AQ99954 AL358472.4-201ENST00000633140 710 ntBASIC16.8■□□□□ 0.28
SMR3AQ99954 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SMR3AQ99954 AC026471.6-201ENST00000622954 1905 ntBASIC16.8■□□□□ 0.28
SMR3AQ99954 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMR3AQ99954 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SMR3AQ99954 AC092053.2-201ENST00000640557 1818 ntBASIC16.8■□□□□ 0.28
SMR3AQ99954 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMR3AQ99954 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SMR3AQ99954 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SMR3AQ99954 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SMR3AQ99954 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SMR3AQ99954 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms