Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 EDA-201ENST00000338901 1233 ntBASIC17.2■□□□□ 0.34
CLCC1Q96S66 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCC1Q96S66 AC027682.1-201ENST00000562846 899 ntBASIC17.2■□□□□ 0.34
CLCC1Q96S66 AF213884.3-201ENST00000563833 479 ntBASIC17.2■□□□□ 0.34
CLCC1Q96S66 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCC1Q96S66 AL355001.2-201ENST00000620617 1191 ntBASIC17.2■□□□□ 0.34
CLCC1Q96S66 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CLCC1Q96S66 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 FEM1AP4-201ENST00000443167 1987 ntBASIC17.2■□□□□ 0.34
CLCC1Q96S66 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCC1Q96S66 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
CLCC1Q96S66 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
CLCC1Q96S66 AP001330.3-201ENST00000520123 633 ntBASIC17.19■□□□□ 0.34
CLCC1Q96S66 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCC1Q96S66 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CLCC1Q96S66 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLCC1Q96S66 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 TSPY26P-201ENST00000476365 1326 ntBASIC17.19■□□□□ 0.34
CLCC1Q96S66 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLCC1Q96S66 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCC1Q96S66 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLCC1Q96S66 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCC1Q96S66 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 AP004607.7-201ENST00000527152 1677 ntBASIC17.17■□□□□ 0.34
CLCC1Q96S66 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.17■□□□□ 0.34
CLCC1Q96S66 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.17■□□□□ 0.34
CLCC1Q96S66 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLCC1Q96S66 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCC1Q96S66 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCC1Q96S66 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCC1Q96S66 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLCC1Q96S66 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLCC1Q96S66 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.16■□□□□ 0.34
CLCC1Q96S66 IGHV3-19-201ENST00000521488 291 ntBASIC17.16■□□□□ 0.34
CLCC1Q96S66 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms