Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IPQ96QF0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB3IPQ96QF0 AC125437.2-201ENST00000625180 2167 ntBASIC20■□□□□ 0.79
RAB3IPQ96QF0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 AC005332.7-201ENST00000614046 2005 ntBASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB3IPQ96QF0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 AC005082.1-201ENST00000413042 2259 ntBASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 NEFHP1-201ENST00000412845 2629 ntBASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB3IPQ96QF0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB3IPQ96QF0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB3IPQ96QF0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
RAB3IPQ96QF0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 AC090340.1-201ENST00000620778 4980 ntBASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 AC139795.1-202ENST00000500444 432 ntBASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB3IPQ96QF0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RAB3IPQ96QF0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms