Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC15.94■□□□□ 0.14
DUX3Q96PT4 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.94■□□□□ 0.14
DUX3Q96PT4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.94■□□□□ 0.14
DUX3Q96PT4 DUSP5P2-201ENST00000426873 1033 ntBASIC15.94■□□□□ 0.14
DUX3Q96PT4 AC073210.2-201ENST00000430369 194 ntBASIC15.94■□□□□ 0.14
DUX3Q96PT4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
DUX3Q96PT4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.94■□□□□ 0.14
DUX3Q96PT4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.94■□□□□ 0.14
DUX3Q96PT4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DUX3Q96PT4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 AC083880.1-201ENST00000608266 535 ntBASIC15.93■□□□□ 0.14
DUX3Q96PT4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC15.93■□□□□ 0.14
DUX3Q96PT4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DUX3Q96PT4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 AC097658.1-201ENST00000475555 843 ntBASIC15.92■□□□□ 0.14
DUX3Q96PT4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.92■□□□□ 0.14
DUX3Q96PT4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
DUX3Q96PT4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 AC007322.3-201ENST00000426526 701 ntBASIC15.91■□□□□ 0.14
DUX3Q96PT4 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 FAM201B-201ENST00000458407 597 ntBASIC15.91■□□□□ 0.14
DUX3Q96PT4 AC091874.3-201ENST00000512672 1195 ntBASIC15.91■□□□□ 0.14
DUX3Q96PT4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 FAM21FP-204ENST00000608637 956 ntBASIC15.91■□□□□ 0.14
DUX3Q96PT4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 TMEM191A-211ENST00000637163 1067 ntBASIC15.91■□□□□ 0.14
DUX3Q96PT4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.91■□□□□ 0.14
DUX3Q96PT4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
DUX3Q96PT4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms