Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAFA1Q96PS6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
GAFA1Q96PS6 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAFA1Q96PS6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 AC093787.1-201ENST00000450396 207 ntBASIC17.08■□□□□ 0.32
GAFA1Q96PS6 AC090192.1-201ENST00000517740 490 ntBASIC17.08■□□□□ 0.32
GAFA1Q96PS6 MIR2861-201ENST00000636310 90 ntBASIC17.08■□□□□ 0.32
GAFA1Q96PS6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.08■□□□□ 0.32
GAFA1Q96PS6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 AC007225.1-201ENST00000566331 1836 ntBASIC17.07■□□□□ 0.32
GAFA1Q96PS6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 CYP21A1P-202ENST00000354927 1481 ntBASIC17.07■□□□□ 0.32
GAFA1Q96PS6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.07■□□□□ 0.32
GAFA1Q96PS6 AC133552.2-202ENST00000575694 574 ntBASIC17.07■□□□□ 0.32
GAFA1Q96PS6 AC100791.3-201ENST00000617619 330 ntBASIC17.07■□□□□ 0.32
GAFA1Q96PS6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 FP700111.2-201ENST00000619190 1892 ntBASIC17.07■□□□□ 0.32
GAFA1Q96PS6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.07■□□□□ 0.32
GAFA1Q96PS6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 AC105036.2-201ENST00000569468 176 ntBASIC17.06■□□□□ 0.32
GAFA1Q96PS6 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
GAFA1Q96PS6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 AC087633.2-202ENST00000565166 1439 ntBASIC17.05■□□□□ 0.32
GAFA1Q96PS6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 MCRIP2P1-201ENST00000394346 511 ntBASIC17.05■□□□□ 0.32
GAFA1Q96PS6 AL512625.2-201ENST00000417533 625 ntBASIC17.05■□□□□ 0.32
GAFA1Q96PS6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 AF201337.1-201ENST00000520239 748 ntBASIC17.05■□□□□ 0.32
GAFA1Q96PS6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GAFA1Q96PS6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 AC010980.2-201ENST00000587099 1412 ntBASIC17.04■□□□□ 0.32
GAFA1Q96PS6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 AL121832.2-201ENST00000610979 668 ntBASIC17.04■□□□□ 0.32
GAFA1Q96PS6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.04■□□□□ 0.32
GAFA1Q96PS6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GAFA1Q96PS6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms