Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CASD1Q96PB1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC22.03■■□□□ 1.12
CASD1Q96PB1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.03■■□□□ 1.12
CASD1Q96PB1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.03■■□□□ 1.12
CASD1Q96PB1 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.03■■□□□ 1.12
CASD1Q96PB1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CASD1Q96PB1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CASD1Q96PB1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CASD1Q96PB1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CASD1Q96PB1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CASD1Q96PB1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CASD1Q96PB1 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CASD1Q96PB1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CASD1Q96PB1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CASD1Q96PB1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.11
CASD1Q96PB1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 SNORA78-201ENST00000459373 127 ntBASIC22.01■■□□□ 1.11
CASD1Q96PB1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.01■■□□□ 1.11
CASD1Q96PB1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CASD1Q96PB1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22■■□□□ 1.11
CASD1Q96PB1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CASD1Q96PB1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
CASD1Q96PB1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CASD1Q96PB1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22■■□□□ 1.11
CASD1Q96PB1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22■■□□□ 1.11
CASD1Q96PB1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
CASD1Q96PB1 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CASD1Q96PB1 AL023875.1-201ENST00000640777 796 ntBASIC22■■□□□ 1.11
CASD1Q96PB1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22■■□□□ 1.11
CASD1Q96PB1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
CASD1Q96PB1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22■■□□□ 1.11
CASD1Q96PB1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CASD1Q96PB1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.99■■□□□ 1.11
CASD1Q96PB1 AC133681.1-201ENST00000465482 601 ntBASIC21.99■■□□□ 1.11
CASD1Q96PB1 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 AC124016.1-201ENST00000609552 612 ntBASIC21.99■■□□□ 1.11
CASD1Q96PB1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CASD1Q96PB1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CASD1Q96PB1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms