Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 SOX15-203ENST00000570788 1093 ntBASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 AC069544.1-201ENST00000609399 999 ntBASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC46A1Q96NT5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SLC46A1Q96NT5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 FBXW4P1-201ENST00000426721 2239 ntBASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC46A1Q96NT5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 POM121L13P-201ENST00000422362 380 ntBASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 AC007322.3-201ENST00000426526 701 ntBASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 FAM210CP-201ENST00000445714 574 ntBASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC46A1Q96NT5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC46A1Q96NT5 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC46A1Q96NT5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.64■□□□□ 0.74
SLC46A1Q96NT5 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC46A1Q96NT5 LINC00565-201ENST00000562710 2331 ntBASIC19.64■□□□□ 0.74
SLC46A1Q96NT5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 AC244015.2-201ENST00000616358 1861 ntBASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC46A1Q96NT5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC46A1Q96NT5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms