Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 AL049597.2-201ENST00000565575 961 ntBASIC24.26■■□□□ 1.47
CDCA5Q96FF9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDCA5Q96FF9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 AC092865.7-201ENST00000641832 219 ntBASIC24.25■■□□□ 1.47
CDCA5Q96FF9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDCA5Q96FF9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 AL590326.2-201ENST00000625139 305 ntBASIC24.24■■□□□ 1.47
CDCA5Q96FF9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDCA5Q96FF9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 AF186192.3-201ENST00000583427 947 ntBASIC24.23■■□□□ 1.47
CDCA5Q96FF9 MIR6786-201ENST00000616843 113 ntBASIC24.23■■□□□ 1.47
CDCA5Q96FF9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC24.23■■□□□ 1.47
CDCA5Q96FF9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDCA5Q96FF9 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 HTR7P1-201ENST00000538670 1336 ntBASIC24.21■■□□□ 1.47
CDCA5Q96FF9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
CDCA5Q96FF9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDCA5Q96FF9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CDCA5Q96FF9 PGM5P4-201ENST00000421970 445 ntBASIC24.2■■□□□ 1.46
CDCA5Q96FF9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.2■■□□□ 1.46
CDCA5Q96FF9 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC24.2■■□□□ 1.46
CDCA5Q96FF9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
CDCA5Q96FF9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC24.2■■□□□ 1.46
CDCA5Q96FF9 AC145285.6-201ENST00000604632 637 ntBASIC24.2■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms