Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 MIR2861-201ENST00000636310 90 ntBASIC21.68■■□□□ 1.06
TRIM11Q96F44 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 AC092720.2-201ENST00000602388 1665 ntBASIC21.68■■□□□ 1.06
TRIM11Q96F44 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TRIM11Q96F44 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM11Q96F44 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.67■■□□□ 1.06
TRIM11Q96F44 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM11Q96F44 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 AC034268.1-201ENST00000441047 882 ntBASIC21.66■■□□□ 1.06
TRIM11Q96F44 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 UBE2DNL-204ENST00000602536 740 ntBASIC21.66■■□□□ 1.06
TRIM11Q96F44 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM11Q96F44 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM11Q96F44 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM11Q96F44 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.65■■□□□ 1.06
TRIM11Q96F44 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 CDV3P1-201ENST00000471403 739 ntBASIC21.65■■□□□ 1.06
TRIM11Q96F44 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.65■■□□□ 1.06
TRIM11Q96F44 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.65■■□□□ 1.06
TRIM11Q96F44 KRT18P61-201ENST00000585825 1298 ntBASIC21.65■■□□□ 1.06
TRIM11Q96F44 MYCNOS-205ENST00000641950 531 ntBASIC21.65■■□□□ 1.06
TRIM11Q96F44 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TRIM11Q96F44 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM11Q96F44 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
TRIM11Q96F44 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
TRIM11Q96F44 AL121603.2-201ENST00000557373 2117 ntBASIC21.64■■□□□ 1.06
TRIM11Q96F44 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.64■■□□□ 1.06
TRIM11Q96F44 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM11Q96F44 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.64■■□□□ 1.06
TRIM11Q96F44 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.64■■□□□ 1.05
TRIM11Q96F44 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM11Q96F44 AC097381.1-201ENST00000429019 1296 ntBASIC21.64■■□□□ 1.05
TRIM11Q96F44 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM11Q96F44 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.64■■□□□ 1.05
TRIM11Q96F44 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
TRIM11Q96F44 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TRIM11Q96F44 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms