Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN23Q96B33 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN23Q96B33 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN23Q96B33 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN23Q96B33 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN23Q96B33 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN23Q96B33 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN23Q96B33 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN23Q96B33 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CLDN23Q96B33 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN23Q96B33 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.68■□□□□ 0.9
CLDN23Q96B33 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN23Q96B33 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN23Q96B33 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CLDN23Q96B33 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN23Q96B33 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.67■□□□□ 0.9
CLDN23Q96B33 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN23Q96B33 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN23Q96B33 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN23Q96B33 ARMC10P1-201ENST00000313754 855 ntBASIC20.67■□□□□ 0.9
CLDN23Q96B33 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
CLDN23Q96B33 AL355355.2-201ENST00000442321 338 ntBASIC20.67■□□□□ 0.9
CLDN23Q96B33 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN23Q96B33 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN23Q96B33 AF186192.3-201ENST00000583427 947 ntBASIC20.67■□□□□ 0.9
CLDN23Q96B33 AL590326.2-201ENST00000625139 305 ntBASIC20.67■□□□□ 0.9
CLDN23Q96B33 AC092865.7-201ENST00000641832 219 ntBASIC20.67■□□□□ 0.9
CLDN23Q96B33 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN23Q96B33 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN23Q96B33 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.67■□□□□ 0.9
CLDN23Q96B33 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN23Q96B33 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN23Q96B33 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN23Q96B33 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.66■□□□□ 0.9
CLDN23Q96B33 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN23Q96B33 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN23Q96B33 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN23Q96B33 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CLDN23Q96B33 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN23Q96B33 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
CLDN23Q96B33 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
CLDN23Q96B33 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.65■□□□□ 0.9
CLDN23Q96B33 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLDN23Q96B33 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN23Q96B33 AL356652.1-201ENST00000615962 565 ntBASIC20.65■□□□□ 0.9
CLDN23Q96B33 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.65■□□□□ 0.9
CLDN23Q96B33 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN23Q96B33 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLDN23Q96B33 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN23Q96B33 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN23Q96B33 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN23Q96B33 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN23Q96B33 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN23Q96B33 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.64■□□□□ 0.89
CLDN23Q96B33 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN23Q96B33 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN23Q96B33 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLDN23Q96B33 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN23Q96B33 AC145285.6-201ENST00000604632 637 ntBASIC20.64■□□□□ 0.89
CLDN23Q96B33 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CLDN23Q96B33 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN23Q96B33 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN23Q96B33 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN23Q96B33 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN23Q96B33 AL353807.1-201ENST00000427475 662 ntBASIC20.63■□□□□ 0.89
CLDN23Q96B33 KRT16P5-201ENST00000455284 522 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms