Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF4Q92544 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF4Q92544 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TM9SF4Q92544 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TM9SF4Q92544 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 FEM1AP4-201ENST00000443167 1987 ntBASIC19.32■□□□□ 0.68
TM9SF4Q92544 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 AL121603.2-201ENST00000557373 2117 ntBASIC19.32■□□□□ 0.68
TM9SF4Q92544 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TM9SF4Q92544 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
TM9SF4Q92544 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF4Q92544 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF4Q92544 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF4Q92544 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.31■□□□□ 0.68
TM9SF4Q92544 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 RARRES2P4-201ENST00000514074 484 ntBASIC19.31■□□□□ 0.68
TM9SF4Q92544 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF4Q92544 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TM9SF4Q92544 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
TM9SF4Q92544 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
TM9SF4Q92544 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TM9SF4Q92544 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF4Q92544 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF4Q92544 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 AC010980.2-201ENST00000587099 1412 ntBASIC19.29■□□□□ 0.68
TM9SF4Q92544 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TM9SF4Q92544 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.29■□□□□ 0.68
TM9SF4Q92544 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.29■□□□□ 0.68
TM9SF4Q92544 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.29■□□□□ 0.68
TM9SF4Q92544 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TM9SF4Q92544 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 AC093827.2-201ENST00000512654 315 ntBASIC19.28■□□□□ 0.68
TM9SF4Q92544 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 AC008687.6-201ENST00000596318 630 ntBASIC19.28■□□□□ 0.68
TM9SF4Q92544 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TM9SF4Q92544 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
TM9SF4Q92544 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms