Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 FAM8A3P-201ENST00000427218 844 ntBASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 CLN6-221ENST00000637494 765 ntTSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 ATP5G2P1-201ENST00000433580 426 ntBASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 AC116562.2-201ENST00000507042 360 ntBASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 AL136038.3-201ENST00000561909 1096 ntBASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
SYNE2Q8WXH0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 F2R-202ENST00000505600 442 ntTSL 2 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AP006587.3-201ENST00000525742 1516 ntBASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC8.44□□□□□ -1.06
SYNE2Q8WXH0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 ABCB10P1-201ENST00000614297 2181 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 TSPY14P-201ENST00000303979 915 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 HES2-202ENST00000377836 507 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 EGLN1P1-201ENST00000531623 762 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 NBPF21P-201ENST00000425093 1451 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 AC068587.7-201ENST00000641602 218 ntBASIC8.43□□□□□ -1.06
SYNE2Q8WXH0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms