Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 AP006294.2-201ENST00000641667 209 ntBASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 Z98882.1-201ENST00000622160 2253 ntBASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
TMEM40Q8WWA1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
TMEM40Q8WWA1 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 AC069544.1-201ENST00000609399 999 ntBASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 AL356652.1-201ENST00000615962 565 ntBASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
TMEM40Q8WWA1 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 AC012676.1-201ENST00000574705 1949 ntBASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 KRT17P3-201ENST00000420566 1262 ntBASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 AL596275.1-201ENST00000423464 877 ntBASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 RPPH1-201ENST00000516869 333 ntBASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TMEM40Q8WWA1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TMEM40Q8WWA1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
TMEM40Q8WWA1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.39■■□□□ 1.18
TMEM40Q8WWA1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 RPS2P4-201ENST00000476944 856 ntBASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 C1QBPP2-201ENST00000528754 825 ntBASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 RN7SL471P-201ENST00000580476 299 ntBASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.39■■□□□ 1.17
TMEM40Q8WWA1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 AC011484.1-201ENST00000377652 1995 ntBASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.38■■□□□ 1.17
TMEM40Q8WWA1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms