Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 MYC-209ENST00000641252 345 ntBASIC18.65■□□□□ 0.58
RNF138Q8WVD3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 AC007225.1-201ENST00000566331 1836 ntBASIC18.65■□□□□ 0.58
RNF138Q8WVD3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.65■□□□□ 0.58
RNF138Q8WVD3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RNF138Q8WVD3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.64■□□□□ 0.58
RNF138Q8WVD3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.64■□□□□ 0.58
RNF138Q8WVD3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.64■□□□□ 0.58
RNF138Q8WVD3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RNF138Q8WVD3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.64■□□□□ 0.57
RNF138Q8WVD3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 MIR4758-201ENST00000577688 71 ntBASIC18.64■□□□□ 0.57
RNF138Q8WVD3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RNF138Q8WVD3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 AC069152.1-201ENST00000438030 544 ntBASIC18.63■□□□□ 0.57
RNF138Q8WVD3 AC098934.4-201ENST00000564127 592 ntBASIC18.63■□□□□ 0.57
RNF138Q8WVD3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RNF138Q8WVD3 AL121603.2-201ENST00000557373 2117 ntBASIC18.62■□□□□ 0.57
RNF138Q8WVD3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF138Q8WVD3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 LSM12P1-201ENST00000411836 588 ntBASIC18.61■□□□□ 0.57
RNF138Q8WVD3 AC091874.3-201ENST00000512672 1195 ntBASIC18.61■□□□□ 0.57
RNF138Q8WVD3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF138Q8WVD3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RNF138Q8WVD3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms