Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.2■□□□□ 0.66
CT55Q8WUE5 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
CT55Q8WUE5 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.2■□□□□ 0.66
CT55Q8WUE5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.2■□□□□ 0.66
CT55Q8WUE5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CT55Q8WUE5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CT55Q8WUE5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.19■□□□□ 0.66
CT55Q8WUE5 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CT55Q8WUE5 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CT55Q8WUE5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CT55Q8WUE5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CT55Q8WUE5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CT55Q8WUE5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CT55Q8WUE5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.18■□□□□ 0.66
CT55Q8WUE5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CT55Q8WUE5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CT55Q8WUE5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CT55Q8WUE5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CT55Q8WUE5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CT55Q8WUE5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.17■□□□□ 0.66
CT55Q8WUE5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CT55Q8WUE5 AC006557.6-201ENST00000623071 864 ntBASIC19.17■□□□□ 0.66
CT55Q8WUE5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.17■□□□□ 0.66
CT55Q8WUE5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.16■□□□□ 0.66
CT55Q8WUE5 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CT55Q8WUE5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.16■□□□□ 0.66
CT55Q8WUE5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CT55Q8WUE5 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.16■□□□□ 0.66
CT55Q8WUE5 Z99916.2-201ENST00000604037 246 ntBASIC19.16■□□□□ 0.66
CT55Q8WUE5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CT55Q8WUE5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CT55Q8WUE5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.15■□□□□ 0.66
CT55Q8WUE5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.15■□□□□ 0.66
CT55Q8WUE5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.15■□□□□ 0.66
CT55Q8WUE5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CT55Q8WUE5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.15■□□□□ 0.66
CT55Q8WUE5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.15■□□□□ 0.66
CT55Q8WUE5 AC005829.2-201ENST00000571422 1056 ntBASIC19.15■□□□□ 0.66
CT55Q8WUE5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.15■□□□□ 0.66
CT55Q8WUE5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CT55Q8WUE5 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.15■□□□□ 0.66
CT55Q8WUE5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms