Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 AC125437.2-201ENST00000625180 2167 ntBASIC20.25■□□□□ 0.83
RFWD2Q8NHY2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RFWD2Q8NHY2 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 AL136116.3-201ENST00000402907 1138 ntBASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 AP005435.1-201ENST00000529293 1178 ntBASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 AL158211.5-201ENST00000623583 2518 ntBASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.23■□□□□ 0.83
RFWD2Q8NHY2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RFWD2Q8NHY2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 BX323043.1-201ENST00000641006 1765 ntBASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.21■□□□□ 0.83
RFWD2Q8NHY2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 SLC47A1P1-202ENST00000449666 945 ntBASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 SMUG1P1-201ENST00000590640 811 ntBASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.2■□□□□ 0.82
RFWD2Q8NHY2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms