Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.07■□□□□ 0.96
SIX5Q8N196 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIX5Q8N196 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SIX5Q8N196 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.07■□□□□ 0.96
SIX5Q8N196 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SIX5Q8N196 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 RARRES2P10-201ENST00000564312 460 ntBASIC21.06■□□□□ 0.96
SIX5Q8N196 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.06■□□□□ 0.96
SIX5Q8N196 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC21.06■□□□□ 0.96
SIX5Q8N196 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.06■□□□□ 0.96
SIX5Q8N196 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SIX5Q8N196 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIX5Q8N196 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX5Q8N196 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX5Q8N196 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SIX5Q8N196 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SIX5Q8N196 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
SIX5Q8N196 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.05■□□□□ 0.96
SIX5Q8N196 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX5Q8N196 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SIX5Q8N196 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.05■□□□□ 0.96
SIX5Q8N196 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SIX5Q8N196 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SIX5Q8N196 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIX5Q8N196 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIX5Q8N196 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIX5Q8N196 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.04■□□□□ 0.96
SIX5Q8N196 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SIX5Q8N196 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIX5Q8N196 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SIX5Q8N196 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SIX5Q8N196 AC006557.6-201ENST00000623071 864 ntBASIC21.04■□□□□ 0.96
SIX5Q8N196 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.04■□□□□ 0.96
SIX5Q8N196 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIX5Q8N196 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SIX5Q8N196 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SIX5Q8N196 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC21.04■□□□□ 0.96
SIX5Q8N196 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SIX5Q8N196 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
SIX5Q8N196 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIX5Q8N196 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIX5Q8N196 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.03■□□□□ 0.96
SIX5Q8N196 AL353708.3-201ENST00000610272 989 ntBASIC21.03■□□□□ 0.96
SIX5Q8N196 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIX5Q8N196 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIX5Q8N196 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SIX5Q8N196 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SIX5Q8N196 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.03■□□□□ 0.96
SIX5Q8N196 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.02■□□□□ 0.96
SIX5Q8N196 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.02■□□□□ 0.96
SIX5Q8N196 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC21.02■□□□□ 0.96
SIX5Q8N196 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.02■□□□□ 0.96
SIX5Q8N196 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.02■□□□□ 0.96
SIX5Q8N196 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SIX5Q8N196 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
SIX5Q8N196 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
SIX5Q8N196 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.02■□□□□ 0.96
SIX5Q8N196 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SIX5Q8N196 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
SIX5Q8N196 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SIX5Q8N196 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
SIX5Q8N196 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.01■□□□□ 0.95
SIX5Q8N196 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SIX5Q8N196 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SIX5Q8N196 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.01■□□□□ 0.95
SIX5Q8N196 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.01■□□□□ 0.95
SIX5Q8N196 AC026471.5-201ENST00000615068 467 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms