Protein–RNA interactions for Protein: Q8IV77

CNGA4, Cyclic nucleotide-gated cation channel alpha-4, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA4Q8IV77 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC22.27■■□□□ 1.16
CNGA4Q8IV77 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CNGA4Q8IV77 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CNGA4Q8IV77 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CNGA4Q8IV77 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CNGA4Q8IV77 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 MIR572-201ENST00000384983 95 ntBASIC22.26■■□□□ 1.15
CNGA4Q8IV77 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CNGA4Q8IV77 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.25■■□□□ 1.15
CNGA4Q8IV77 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CNGA4Q8IV77 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 POU5F1P4-201ENST00000413175 1085 ntBASIC22.24■■□□□ 1.15
CNGA4Q8IV77 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 AC008175.2-201ENST00000612840 297 ntBASIC22.24■■□□□ 1.15
CNGA4Q8IV77 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CNGA4Q8IV77 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CNGA4Q8IV77 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CNGA4Q8IV77 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CNGA4Q8IV77 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms