Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL23A1Q86Y22 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL23A1Q86Y22 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL23A1Q86Y22 AC079598.2-202ENST00000546624 1451 ntBASIC26.04■■□□□ 1.76
COL23A1Q86Y22 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 RBM17P1-201ENST00000453646 1190 ntBASIC26.03■■□□□ 1.76
COL23A1Q86Y22 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 Six3os1_6.1-201ENST00000620790 196 ntBASIC26.03■■□□□ 1.76
COL23A1Q86Y22 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL23A1Q86Y22 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 AL390719.1-204ENST00000412397 1219 ntBASIC26.02■■□□□ 1.76
COL23A1Q86Y22 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL23A1Q86Y22 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.01■■□□□ 1.75
COL23A1Q86Y22 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL23A1Q86Y22 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL23A1Q86Y22 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL23A1Q86Y22 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
COL23A1Q86Y22 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL23A1Q86Y22 SRI-203ENST00000419179 1307 ntTSL 2 BASIC26■■□□□ 1.75
COL23A1Q86Y22 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26■■□□□ 1.75
COL23A1Q86Y22 AC113347.1-201ENST00000413321 391 ntBASIC26■■□□□ 1.75
COL23A1Q86Y22 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL23A1Q86Y22 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC26■■□□□ 1.75
COL23A1Q86Y22 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26■■□□□ 1.75
COL23A1Q86Y22 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26■■□□□ 1.75
COL23A1Q86Y22 DUT-205ENST00000558813 769 ntTSL 2 BASIC26■■□□□ 1.75
COL23A1Q86Y22 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC26■■□□□ 1.75
COL23A1Q86Y22 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL23A1Q86Y22 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
COL23A1Q86Y22 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26■■□□□ 1.75
COL23A1Q86Y22 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 RBM42-202ENST00000586618 771 ntTSL 3 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
COL23A1Q86Y22 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 AP000525.1-201ENST00000608286 694 ntBASIC25.98■■□□□ 1.75
COL23A1Q86Y22 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL23A1Q86Y22 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL23A1Q86Y22 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms