Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.48■□□□□ 0.39
CSMD2Q7Z408 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 DUSP5P1-201ENST00000441325 1139 ntBASIC17.47■□□□□ 0.39
CSMD2Q7Z408 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 AC110285.5-201ENST00000611501 352 ntBASIC17.47■□□□□ 0.39
CSMD2Q7Z408 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CSMD2Q7Z408 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 UNC93B2-201ENST00000285383 730 ntBASIC17.46■□□□□ 0.39
CSMD2Q7Z408 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CSMD2Q7Z408 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CSMD2Q7Z408 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.46■□□□□ 0.38
CSMD2Q7Z408 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 AL358472.4-201ENST00000633140 710 ntBASIC17.45■□□□□ 0.38
CSMD2Q7Z408 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.45■□□□□ 0.38
CSMD2Q7Z408 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 AC104076.2-201ENST00000448912 469 ntBASIC17.44■□□□□ 0.38
CSMD2Q7Z408 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 MYC-208ENST00000641036 567 ntBASIC17.44■□□□□ 0.38
CSMD2Q7Z408 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 SLC25A3P1-201ENST00000443844 931 ntBASIC17.44■□□□□ 0.38
CSMD2Q7Z408 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CSMD2Q7Z408 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 AC027702.1-201ENST00000563810 1770 ntBASIC17.43■□□□□ 0.38
CSMD2Q7Z408 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CSMD2Q7Z408 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms