Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 AC027612.3-201ENST00000413684 1047 ntBASIC18.85■□□□□ 0.61
TUBA1AQ71U36 AC026271.2-201ENST00000428091 497 ntBASIC18.85■□□□□ 0.61
TUBA1AQ71U36 AC087623.3-201ENST00000607047 1098 ntBASIC18.85■□□□□ 0.61
TUBA1AQ71U36 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TUBA1AQ71U36 AC026471.6-201ENST00000622954 1905 ntBASIC18.84■□□□□ 0.61
TUBA1AQ71U36 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 PCDHAC2-203ENST00000615316 3011 ntBASIC18.84■□□□□ 0.61
TUBA1AQ71U36 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 AP004607.7-201ENST00000527152 1677 ntBASIC18.84■□□□□ 0.61
TUBA1AQ71U36 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 BX005040.4-201ENST00000637145 1518 ntBASIC18.84■□□□□ 0.61
TUBA1AQ71U36 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TUBA1AQ71U36 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
TUBA1AQ71U36 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 YBX1P1-201ENST00000445822 960 ntBASIC18.83■□□□□ 0.6
TUBA1AQ71U36 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TUBA1AQ71U36 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TUBA1AQ71U36 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 AC097381.1-201ENST00000429019 1296 ntBASIC18.81■□□□□ 0.6
TUBA1AQ71U36 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.81■□□□□ 0.6
TUBA1AQ71U36 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TUBA1AQ71U36 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms