Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RAPH1Q70E73 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.55■□□□□ 0.88
RAPH1Q70E73 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 AC079140.4-201ENST00000507448 529 ntBASIC20.55■□□□□ 0.88
RAPH1Q70E73 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.55■□□□□ 0.88
RAPH1Q70E73 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAPH1Q70E73 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAPH1Q70E73 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPH1Q70E73 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPH1Q70E73 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAPH1Q70E73 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPH1Q70E73 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAPH1Q70E73 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.54■□□□□ 0.88
RAPH1Q70E73 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAPH1Q70E73 AC011484.1-201ENST00000377652 1995 ntBASIC20.54■□□□□ 0.88
RAPH1Q70E73 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPH1Q70E73 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPH1Q70E73 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPH1Q70E73 PCDHAC2-203ENST00000615316 3011 ntBASIC20.53■□□□□ 0.88
RAPH1Q70E73 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPH1Q70E73 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RAPH1Q70E73 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
RAPH1Q70E73 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPH1Q70E73 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.53■□□□□ 0.88
RAPH1Q70E73 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAPH1Q70E73 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RAPH1Q70E73 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
RAPH1Q70E73 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.53■□□□□ 0.88
RAPH1Q70E73 AC020907.5-201ENST00000624372 1936 ntBASIC20.53■□□□□ 0.88
RAPH1Q70E73 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAPH1Q70E73 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.53■□□□□ 0.88
RAPH1Q70E73 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPH1Q70E73 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPH1Q70E73 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPH1Q70E73 KRT87P-202ENST00000534226 1464 ntBASIC20.52■□□□□ 0.88
RAPH1Q70E73 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPH1Q70E73 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RAPH1Q70E73 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPH1Q70E73 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAPH1Q70E73 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
RAPH1Q70E73 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
RAPH1Q70E73 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.87
RAPH1Q70E73 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPH1Q70E73 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPH1Q70E73 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAPH1Q70E73 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 POU5F1P4-201ENST00000413175 1085 ntBASIC20.51■□□□□ 0.87
RAPH1Q70E73 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.51■□□□□ 0.87
RAPH1Q70E73 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RAPH1Q70E73 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPH1Q70E73 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPH1Q70E73 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
RAPH1Q70E73 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPH1Q70E73 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPH1Q70E73 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPH1Q70E73 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RAPH1Q70E73 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms