Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 AC068338.2-201ENST00000563278 1430 ntBASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.7■□□□□ 0.42
COLCA1Q6ZS62 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 AC016405.3-201ENST00000607710 860 ntBASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 AC231657.2-201ENST00000624556 255 ntBASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
COLCA1Q6ZS62 AC020907.5-201ENST00000624372 1936 ntBASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 LINC01006-201ENST00000333319 2292 ntBASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COLCA1Q6ZS62 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
COLCA1Q6ZS62 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 KRT8P36-201ENST00000489121 1440 ntBASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 RARRES2P4-201ENST00000514074 484 ntBASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 AC100791.3-201ENST00000617619 330 ntBASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
COLCA1Q6ZS62 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 AC007322.1-201ENST00000426983 750 ntBASIC17.65■□□□□ 0.42
COLCA1Q6ZS62 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms