Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
PPP4R3CPQ6ZMV5 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R3CPQ6ZMV5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R3CPQ6ZMV5 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R3CPQ6ZMV5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PPP4R3CPQ6ZMV5 AC008033.3-201ENST00000612531 1407 ntBASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 RPS14P4-201ENST00000415880 418 ntBASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 AC010141.2-201ENST00000452426 721 ntBASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 AP001981.1-201ENST00000531132 738 ntBASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 NUDT4-205ENST00000548662 765 ntTSL 3 BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 AP001160.3-201ENST00000601484 763 ntBASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PPP4R3CPQ6ZMV5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PPP4R3CPQ6ZMV5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.32
PPP4R3CPQ6ZMV5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.33■■□□□ 1.32
PPP4R3CPQ6ZMV5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 RPS3AP29-201ENST00000437728 769 ntBASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 MTCYBP11-201ENST00000447254 1109 ntBASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC012181.2-201ENST00000570210 699 ntBASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AP000484.1-201ENST00000620067 1252 ntBASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC008764.6-201ENST00000595909 2069 ntBASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC019070.1-201ENST00000415008 1024 ntBASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC022616.2-201ENST00000523185 300 ntBASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PPP4R3CPQ6ZMV5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 RNU6-775P-201ENST00000459318 96 ntBASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PPP4R3CPQ6ZMV5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 GCNT6-201ENST00000379591 934 ntBASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC090192.1-201ENST00000517740 490 ntBASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 AL021368.1-201ENST00000607490 540 ntBASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 BID-214ENST00000617586 542 ntTSL 5 BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PPP4R3CPQ6ZMV5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PPP4R3CPQ6ZMV5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms