Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 KRT18P68-201ENST00000392293 1000 ntBASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.57■□□□□ 0.72
PRAMEF17Q5VTA0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRAMEF17Q5VTA0 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRAMEF17Q5VTA0 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 AC008687.6-201ENST00000596318 630 ntBASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 AL589743.5-201ENST00000616611 1050 ntBASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF17Q5VTA0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 ESRRAP1-201ENST00000400596 1257 ntBASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF17Q5VTA0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms