Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FAM78BQ5VT40 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 SERBP1P1-201ENST00000396021 1160 ntBASIC16.21■□□□□ 0.19
FAM78BQ5VT40 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
FAM78BQ5VT40 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.21■□□□□ 0.18
FAM78BQ5VT40 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM78BQ5VT40 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
FAM78BQ5VT40 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.21■□□□□ 0.18
FAM78BQ5VT40 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM78BQ5VT40 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
FAM78BQ5VT40 AC112907.3-201ENST00000577781 2400 ntBASIC16.2■□□□□ 0.18
FAM78BQ5VT40 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 AP005435.1-201ENST00000529293 1178 ntBASIC16.2■□□□□ 0.18
FAM78BQ5VT40 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 AL138724.1-201ENST00000606771 1088 ntBASIC16.2■□□□□ 0.18
FAM78BQ5VT40 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FAM78BQ5VT40 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
FAM78BQ5VT40 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms