Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC31.38■■■□□ 2.61
CDC42BPAQ5VT25 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CDC42BPAQ5VT25 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CDC42BPAQ5VT25 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC31.37■■■□□ 2.61
CDC42BPAQ5VT25 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC31.37■■■□□ 2.61
CDC42BPAQ5VT25 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC31.37■■■□□ 2.61
CDC42BPAQ5VT25 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC31.37■■■□□ 2.61
CDC42BPAQ5VT25 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 ABHD17AP6-201ENST00000458502 1044 ntBASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 HES2-206ENST00000489730 730 ntTSL 2 BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC31.36■■■□□ 2.61
CDC42BPAQ5VT25 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 ME2-206ENST00000638410 2289 ntTSL 5 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 ME2-210ENST00000639255 2262 ntTSL 5 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 CASK-201ENST00000378154 2494 ntTSL 5 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
CDC42BPAQ5VT25 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 AC120498.8-201ENST00000614275 531 ntBASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CDC42BPAQ5VT25 GOLGA2P6-201ENST00000340929 2049 ntBASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 RARRES2P10-201ENST00000564312 460 ntBASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CDC42BPAQ5VT25 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 AC087499.1-201ENST00000418141 1075 ntBASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 AC012306.2-201ENST00000609350 630 ntBASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 AC110285.5-201ENST00000611501 352 ntBASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 Six3os1_6.1-201ENST00000620790 196 ntBASIC31.32■■■□□ 2.61
CDC42BPAQ5VT25 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 AC211429.1-201ENST00000415277 523 ntBASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CDC42BPAQ5VT25 AC006557.6-201ENST00000623071 864 ntBASIC31.31■■■□□ 2.6
CDC42BPAQ5VT25 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC31.31■■■□□ 2.6
CDC42BPAQ5VT25 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC31.31■■■□□ 2.6
CDC42BPAQ5VT25 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CDC42BPAQ5VT25 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CDC42BPAQ5VT25 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms