Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC063952.2-201ENST00000498792 1227 ntBASIC18.02■□□□□ 0.48
LRRK2Q5S007 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.02■□□□□ 0.48
LRRK2Q5S007 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.02■□□□□ 0.48
LRRK2Q5S007 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRK2Q5S007 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.02■□□□□ 0.47
LRRK2Q5S007 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRK2Q5S007 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.02■□□□□ 0.47
LRRK2Q5S007 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
LRRK2Q5S007 AC022616.7-201ENST00000525383 220 ntBASIC18.02■□□□□ 0.47
LRRK2Q5S007 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRK2Q5S007 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 AC027702.1-201ENST00000563810 1770 ntBASIC18.01■□□□□ 0.47
LRRK2Q5S007 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 LINC01124-201ENST00000409786 2117 ntBASIC18.01■□□□□ 0.47
LRRK2Q5S007 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 AC142381.3-201ENST00000568208 1670 ntBASIC18.01■□□□□ 0.47
LRRK2Q5S007 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRRK2Q5S007 CLEC4GP1-201ENST00000596555 870 ntBASIC18.01■□□□□ 0.47
LRRK2Q5S007 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.01■□□□□ 0.47
LRRK2Q5S007 AC004263.2-201ENST00000617183 678 ntBASIC18.01■□□□□ 0.47
LRRK2Q5S007 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 ANOS2P-203ENST00000472227 1816 ntBASIC18■□□□□ 0.47
LRRK2Q5S007 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18■□□□□ 0.47
LRRK2Q5S007 FAM8A6P-201ENST00000407496 1135 ntBASIC18■□□□□ 0.47
LRRK2Q5S007 SAPCD2P2-201ENST00000431719 1174 ntBASIC18■□□□□ 0.47
LRRK2Q5S007 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18■□□□□ 0.47
LRRK2Q5S007 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18■□□□□ 0.47
LRRK2Q5S007 C2orf69P3-201ENST00000565542 1120 ntBASIC18■□□□□ 0.47
LRRK2Q5S007 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18■□□□□ 0.47
LRRK2Q5S007 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18■□□□□ 0.47
LRRK2Q5S007 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18■□□□□ 0.47
LRRK2Q5S007 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LRRK2Q5S007 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18■□□□□ 0.47
LRRK2Q5S007 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18■□□□□ 0.47
LRRK2Q5S007 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LRRK2Q5S007 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRRK2Q5S007 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 C11orf96-202ENST00000528572 1834 ntBASIC17.99■□□□□ 0.47
LRRK2Q5S007 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRK2Q5S007 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 AC023511.2-201ENST00000618803 211 ntBASIC17.99■□□□□ 0.47
LRRK2Q5S007 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRK2Q5S007 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRK2Q5S007 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRK2Q5S007 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRK2Q5S007 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 AL031133.1-201ENST00000406807 723 ntBASIC17.99■□□□□ 0.47
LRRK2Q5S007 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRRK2Q5S007 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LRRK2Q5S007 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRRK2Q5S007 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 NBPF21P-201ENST00000425093 1451 ntBASIC17.98■□□□□ 0.47
LRRK2Q5S007 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRRK2Q5S007 MIR1238-201ENST00000408483 83 ntBASIC17.98■□□□□ 0.47
LRRK2Q5S007 HCG4P8-203ENST00000443049 980 ntBASIC17.98■□□□□ 0.47
LRRK2Q5S007 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.98■□□□□ 0.47
LRRK2Q5S007 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms