Protein–RNA interactions for Protein: Q31612

HLA-B, HLA class I histocompatibility antigen, B-73 alpha chain, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-BQ31612 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-BQ31612 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-BQ31612 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-BQ31612 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-BQ31612 MIR4785-201ENST00000585005 73 ntBASIC20.04■□□□□ 0.8
HLA-BQ31612 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-BQ31612 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
HLA-BQ31612 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.04■□□□□ 0.8
HLA-BQ31612 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
HLA-BQ31612 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-BQ31612 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-BQ31612 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-BQ31612 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-BQ31612 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.04■□□□□ 0.8
HLA-BQ31612 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HLA-BQ31612 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 C9orf163-202ENST00000624034 2573 ntBASIC20.03■□□□□ 0.8
HLA-BQ31612 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
HLA-BQ31612 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
HLA-BQ31612 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-BQ31612 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.03■□□□□ 0.8
HLA-BQ31612 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.03■□□□□ 0.8
HLA-BQ31612 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-BQ31612 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-BQ31612 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.03■□□□□ 0.8
HLA-BQ31612 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
HLA-BQ31612 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.03■□□□□ 0.8
HLA-BQ31612 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-BQ31612 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-BQ31612 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-BQ31612 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-BQ31612 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-BQ31612 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-BQ31612 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-BQ31612 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-BQ31612 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.02■□□□□ 0.8
HLA-BQ31612 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HLA-BQ31612 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.02■□□□□ 0.8
HLA-BQ31612 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
HLA-BQ31612 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.02■□□□□ 0.8
HLA-BQ31612 AC113410.3-201ENST00000623366 203 ntBASIC20.02■□□□□ 0.8
HLA-BQ31612 AC133561.5-201ENST00000635547 218 ntBASIC20.02■□□□□ 0.8
HLA-BQ31612 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HLA-BQ31612 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
HLA-BQ31612 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.02■□□□□ 0.79
HLA-BQ31612 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
HLA-BQ31612 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-BQ31612 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 TSPY15P-201ENST00000457163 923 ntBASIC20.01■□□□□ 0.79
HLA-BQ31612 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-BQ31612 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-BQ31612 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-BQ31612 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
HLA-BQ31612 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-BQ31612 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 AL356652.1-201ENST00000615962 565 ntBASIC20.01■□□□□ 0.79
HLA-BQ31612 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-BQ31612 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.01■□□□□ 0.79
HLA-BQ31612 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.01■□□□□ 0.79
HLA-BQ31612 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HLA-BQ31612 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HLA-BQ31612 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20■□□□□ 0.79
HLA-BQ31612 AC087499.1-201ENST00000418141 1075 ntBASIC20■□□□□ 0.79
HLA-BQ31612 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 PRKY-204ENST00000533551 1019 ntBASIC20■□□□□ 0.79
HLA-BQ31612 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20■□□□□ 0.79
HLA-BQ31612 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
HLA-BQ31612 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20■□□□□ 0.79
HLA-BQ31612 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HLA-BQ31612 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-BQ31612 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.99■□□□□ 0.79
HLA-BQ31612 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-BQ31612 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HLA-BQ31612 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HLA-BQ31612 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms