Protein–RNA interactions for Protein: Q12441

TY1A-DR3, Transposon Ty1-DR3 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-DR3Q12441 TAF7YMR227C 1773 nt3.95□□□□□ -1.78
TY1A-DR3Q12441 YKL156C-AYKL156C-A 117 nt3.95□□□□□ -1.78
TY1A-DR3Q12441 YNL028WYNL028W 318 nt3.95□□□□□ -1.78
TY1A-DR3Q12441 ACE2YLR131C 2313 nt3.95□□□□□ -1.78
TY1A-DR3Q12441 GYP7YDL234C 2241 nt3.94□□□□□ -1.78
TY1A-DR3Q12441 RPS18BYML026C 441 nt3.94□□□□□ -1.78
TY1A-DR3Q12441 YPR063CYPR063C 423 nt3.94□□□□□ -1.78
TY1A-DR3Q12441 GPI13YLL031C 3054 nt3.94□□□□□ -1.78
TY1A-DR3Q12441 VMA1YDL185W 3216 nt3.94□□□□□ -1.78
TY1A-DR3Q12441 RAD54YGL163C 2697 nt3.94□□□□□ -1.78
TY1A-DR3Q12441 PHO2YDL106C 1680 nt3.94□□□□□ -1.78
TY1A-DR3Q12441 NRP1YDL167C 2160 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 UBP5YER144C 2418 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 YGR250CYGR250C 2346 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 YHL041WYHL041W 450 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 RRT15YLR162W-A 189 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 YBL006W-AYBL006W-A 150 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 HHT1YBR010W 411 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 CUL3YGR003W 2235 nt3.93□□□□□ -1.78
TY1A-DR3Q12441 GRS2YPR081C 1857 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 BIT61YJL058C 1632 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 ARK1YNL020C 1917 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 YDL041WYDL041W 354 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 IGO2YHR132W-A 396 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 PCC1YKR095W-A 267 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 RPL23AYBL087C 414 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 LDS2YOL047C 1071 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 YOR329W-AYOR329W-A 210 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 YOR381W-AYOR381W-A 168 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 NMA111YNL123W 2994 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 AIM21YIR003W 2040 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 YIL166CYIL166C 1629 nt3.92□□□□□ -1.78
TY1A-DR3Q12441 TUB2YFL037W 1374 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 SEA4YBL104C 3117 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 YAP1YML007W 1953 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 ECM22YLR228C 2445 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 SWI1YPL016W 3945 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 HPA3YEL066W 540 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 RPL36AYMR194W 303 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 YBR224WYBR224W 516 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 TRZ1YKR079C 2517 nt3.91□□□□□ -1.78
TY1A-DR3Q12441 KHA1YJL094C 2622 nt3.9□□□□□ -1.79
TY1A-DR3Q12441 AIM11YER093C-A 414 nt3.9□□□□□ -1.79
TY1A-DR3Q12441 NCE101YJL205C 162 nt3.9□□□□□ -1.79
TY1A-DR3Q12441 YMR321CYMR321C 318 nt3.9□□□□□ -1.79
TY1A-DR3Q12441 MUS81YDR386W 1899 nt3.9□□□□□ -1.79
TY1A-DR3Q12441 SRO7YPR032W 3102 nt3.89□□□□□ -1.79
TY1A-DR3Q12441 IOC3YFR013W 2364 nt3.89□□□□□ -1.79
TY1A-DR3Q12441 SRL3YKR091W 741 nt3.89□□□□□ -1.79
TY1A-DR3Q12441 ASC1YMR116C 960 nt3.89□□□□□ -1.79
TY1A-DR3Q12441 YMR326CYMR326C 309 nt3.89□□□□□ -1.79
TY1A-DR3Q12441 SAR1YPL218W 573 nt3.89□□□□□ -1.79
TY1A-DR3Q12441 snR52snR52 92 nt3.89□□□□□ -1.79
TY1A-DR3Q12441 LEU3YLR451W 2661 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 PDR5YOR153W 4536 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 KGD1YIL125W 3045 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 SPI1YER150W 447 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 YGL239CYGL239C 315 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 DAL82YNL314W 768 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 CSE2YNR010W 450 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 URB2YJR041C 3525 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 NUP82YJL061W 2142 nt3.88□□□□□ -1.79
TY1A-DR3Q12441 TEL1YBL088C 8364 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 THI21YPL258C 1656 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 PFK26YIL107C 2484 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 FUN12YAL035W 3009 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 YDR089WYDR089W 2610 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 YDL247W-AYDL247W-A 75 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 SMT3YDR510W 306 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 YLL007CYLL007C 1998 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 YPK1YKL126W 2043 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 RRN6YBL014C 2685 nt3.87□□□□□ -1.79
TY1A-DR3Q12441 FAA1YOR317W 2103 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 VPS64YDR200C 1815 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 JHD2YJR119C 2187 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 NPC2YDL046W 522 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 snR79snR79 84 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 YIL058WYIL058W 285 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 RPS27AYKL156W 249 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 YLR120W-AYLR120W-A 102 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 SNF2YOR290C 5112 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 AI5_ALPHAQ0070 1893 nt3.86□□□□□ -1.79
TY1A-DR3Q12441 YPR146CYPR146C 330 nt3.85□□□□□ -1.79
TY1A-DR3Q12441 NUT2YPR168W 474 nt3.85□□□□□ -1.79
TY1A-DR3Q12441 FMP32YFL046W 624 nt3.84□□□□□ -1.79
TY1A-DR3Q12441 YGL217CYGL217C 342 nt3.84□□□□□ -1.79
TY1A-DR3Q12441 YJL222W-BYJL222W-B 138 nt3.84□□□□□ -1.79
TY1A-DR3Q12441 SWC7YLR385C 399 nt3.84□□□□□ -1.79
TY1A-DR3Q12441 SNU13YEL026W 381 nt3.83□□□□□ -1.8
TY1A-DR3Q12441 YMR105W-AYMR105W-A 195 nt3.83□□□□□ -1.8
TY1A-DR3Q12441 YNR075C-AYNR075C-A 93 nt3.83□□□□□ -1.8
TY1A-DR3Q12441 CDH1YGL003C 1701 nt3.83□□□□□ -1.8
TY1A-DR3Q12441 CDC24YAL041W 2565 nt3.82□□□□□ -1.8
TY1A-DR3Q12441 YGR237CYGR237C 2358 nt3.82□□□□□ -1.8
TY1A-DR3Q12441 YDL176WYDL176W 2127 nt3.82□□□□□ -1.8
TY1A-DR3Q12441 SLM2YNL047C 1971 nt3.82□□□□□ -1.8
TY1A-DR3Q12441 TCP1YDR212W 1680 nt3.82□□□□□ -1.8
TY1A-DR3Q12441 ECM5YMR176W 4236 nt3.82□□□□□ -1.8
TY1A-DR3Q12441 YGR022CYGR022C 330 nt3.82□□□□□ -1.8
TY1A-DR3Q12441 RPS27BYHR021C 249 nt3.82□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms