Protein–RNA interactions for Protein: Q08417

RSB1, Sphingoid long-chain base transporter RSB1, yeastyeast

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSB1Q08417 SLP1YOR154W 1764 nt3.56□□□□□ -1.84
RSB1Q08417 CWH41YGL027C 2502 nt3.55□□□□□ -1.84
RSB1Q08417 SPP382YLR424W 2127 nt3.55□□□□□ -1.84
RSB1Q08417 tC(GCA)BtC(GCA)B 72 nt3.55□□□□□ -1.84
RSB1Q08417 tC(GCA)GtC(GCA)G 72 nt3.55□□□□□ -1.84
RSB1Q08417 tC(GCA)P1tC(GCA)P1 72 nt3.55□□□□□ -1.84
RSB1Q08417 tC(GCA)P2tC(GCA)P2 72 nt3.55□□□□□ -1.84
RSB1Q08417 RKM1YPL208W 1752 nt3.55□□□□□ -1.84
RSB1Q08417 ATP22YDR350C 2055 nt3.55□□□□□ -1.84
RSB1Q08417 DAN4YJR151C 3486 nt3.54□□□□□ -1.84
RSB1Q08417 TOP1YOL006C 2310 nt3.54□□□□□ -1.84
RSB1Q08417 MPS1YDL028C 2295 nt3.54□□□□□ -1.84
RSB1Q08417 JJJ2YJL162C 1752 nt3.54□□□□□ -1.84
RSB1Q08417 XRS2YDR369C 2565 nt3.54□□□□□ -1.84
RSB1Q08417 SNF12YNR023W 1701 nt3.53□□□□□ -1.84
RSB1Q08417 MSD1YPL104W 1977 nt3.53□□□□□ -1.84
RSB1Q08417 CCM1YGR150C 2595 nt3.53□□□□□ -1.84
RSB1Q08417 PHM6YDR281C 315 nt3.53□□□□□ -1.84
RSB1Q08417 TMA19YKL056C 504 nt3.53□□□□□ -1.84
RSB1Q08417 PSY1YKL076C 384 nt3.53□□□□□ -1.84
RSB1Q08417 RPL26AYLR344W 384 nt3.53□□□□□ -1.84
RSB1Q08417 ISU1YPL135W 498 nt3.53□□□□□ -1.84
RSB1Q08417 MUS81YDR386W 1899 nt3.53□□□□□ -1.84
RSB1Q08417 VHR2YER064C 1518 nt3.53□□□□□ -1.84
RSB1Q08417 RRN6YBL014C 2685 nt3.53□□□□□ -1.84
RSB1Q08417 YLL032CYLL032C 2478 nt3.52□□□□□ -1.85
RSB1Q08417 ATP25YMR098C 1839 nt3.52□□□□□ -1.85
RSB1Q08417 TIF35YDR429C 825 nt3.52□□□□□ -1.85
RSB1Q08417 RPB9YGL070C 369 nt3.52□□□□□ -1.85
RSB1Q08417 tT(UGU)Q1tT(UGU)Q1 76 nt3.52□□□□□ -1.85
RSB1Q08417 YOL160WYOL160W 342 nt3.52□□□□□ -1.85
RSB1Q08417 STU1YBL034C 4542 nt3.52□□□□□ -1.85
RSB1Q08417 URB2YJR041C 3525 nt3.51□□□□□ -1.85
RSB1Q08417 TSA2YDR453C 591 nt3.51□□□□□ -1.85
RSB1Q08417 APQ12YIL040W 417 nt3.51□□□□□ -1.85
RSB1Q08417 MYO3YKL129C 3819 nt3.51□□□□□ -1.85
RSB1Q08417 TAR1YLR154W-C 375 nt3.51□□□□□ -1.85
RSB1Q08417 YAR070CYAR070C 300 nt3.51□□□□□ -1.85
RSB1Q08417 TMA10YLR327C 261 nt3.51□□□□□ -1.85
RSB1Q08417 YBL008W-AYBL008W-A 240 nt3.51□□□□□ -1.85
RSB1Q08417 PAC1YOR269W 1485 nt3.51□□□□□ -1.85
RSB1Q08417 ALA1YOR335C 2877 nt3.51□□□□□ -1.85
RSB1Q08417 YLR352WYLR352W 2424 nt3.51□□□□□ -1.85
RSB1Q08417 RED1YLR263W 2484 nt3.5□□□□□ -1.85
RSB1Q08417 tV(CAC)DtV(CAC)D 73 nt3.5□□□□□ -1.85
RSB1Q08417 tV(CAC)HtV(CAC)H 73 nt3.5□□□□□ -1.85
RSB1Q08417 TIM8YJR135W-A 264 nt3.5□□□□□ -1.85
RSB1Q08417 YPR053CYPR053C 456 nt3.5□□□□□ -1.85
RSB1Q08417 CIN1YOR349W 3045 nt3.5□□□□□ -1.85
RSB1Q08417 OSW7YFR039C 1533 nt3.49□□□□□ -1.85
RSB1Q08417 PHO81YGR233C 3537 nt3.49□□□□□ -1.85
RSB1Q08417 TMA108YIL137C 2841 nt3.49□□□□□ -1.85
RSB1Q08417 TLC1TLC1 1301 nt3.49□□□□□ -1.85
RSB1Q08417 COX1Q0045 1605 nt3.49□□□□□ -1.85
RSB1Q08417 WIP1YDR374W-A 270 nt3.49□□□□□ -1.85
RSB1Q08417 AIM11YER093C-A 414 nt3.49□□□□□ -1.85
RSB1Q08417 ALG13YGL047W 609 nt3.49□□□□□ -1.85
RSB1Q08417 PFD1YJL179W 330 nt3.49□□□□□ -1.85
RSB1Q08417 YJL182CYJL182C 318 nt3.49□□□□□ -1.85
RSB1Q08417 SHH3YMR118C 591 nt3.49□□□□□ -1.85
RSB1Q08417 RSF2YJR127C 4143 nt3.49□□□□□ -1.85
RSB1Q08417 YGR027W-BYGR027W-B 5268 nt3.49□□□□□ -1.85
RSB1Q08417 YLR227W-BYLR227W-B 5268 nt3.49□□□□□ -1.85
RSB1Q08417 YPR158C-DYPR158C-D 5268 nt3.49□□□□□ -1.85
RSB1Q08417 TRZ1YKR079C 2517 nt3.48□□□□□ -1.85
RSB1Q08417 YGR237CYGR237C 2358 nt3.48□□□□□ -1.85
RSB1Q08417 FAA2YER015W 2235 nt3.48□□□□□ -1.85
RSB1Q08417 PCF11YDR228C 1881 nt3.48□□□□□ -1.85
RSB1Q08417 YDL176WYDL176W 2127 nt3.48□□□□□ -1.85
RSB1Q08417 ATP8Q0080 147 nt3.48□□□□□ -1.85
RSB1Q08417 YIL066W-AYIL066W-A 444 nt3.48□□□□□ -1.85
RSB1Q08417 TMA22YJR014W 597 nt3.48□□□□□ -1.85
RSB1Q08417 RSM19YNR037C 276 nt3.48□□□□□ -1.85
RSB1Q08417 YOR050CYOR050C 348 nt3.48□□□□□ -1.85
RSB1Q08417 YCL023CYCL023C 348 nt3.48□□□□□ -1.85
RSB1Q08417 MCD1YDL003W 1701 nt3.47□□□□□ -1.85
RSB1Q08417 YDR344CYDR344C 444 nt3.47□□□□□ -1.85
RSB1Q08417 YGL149WYGL149W 306 nt3.47□□□□□ -1.85
RSB1Q08417 PAM16YJL104W 450 nt3.47□□□□□ -1.85
RSB1Q08417 LSM1YJL124C 519 nt3.47□□□□□ -1.85
RSB1Q08417 HEM4YOR278W 828 nt3.47□□□□□ -1.85
RSB1Q08417 YBR137WYBR137W 540 nt3.47□□□□□ -1.85
RSB1Q08417 SEA4YBL104C 3117 nt3.47□□□□□ -1.85
RSB1Q08417 URA2YJL130C 6645 nt3.46□□□□□ -1.85
RSB1Q08417 CCT7YJL111W 1653 nt3.46□□□□□ -1.85
RSB1Q08417 KHA1YJL094C 2622 nt3.46□□□□□ -1.86
RSB1Q08417 ARP7YPR034W 1434 nt3.46□□□□□ -1.86
RSB1Q08417 RNR1YER070W 2667 nt3.46□□□□□ -1.86
RSB1Q08417 HTL1YCR020W-B 237 nt3.46□□□□□ -1.86
RSB1Q08417 YDL011CYDL011C 324 nt3.46□□□□□ -1.86
RSB1Q08417 RPL35AYDL191W 363 nt3.46□□□□□ -1.86
RSB1Q08417 SPT4YGR063C 309 nt3.46□□□□□ -1.86
RSB1Q08417 PEX11YOL147C 711 nt3.46□□□□□ -1.86
RSB1Q08417 RSC1YGR056W 2787 nt3.46□□□□□ -1.86
RSB1Q08417 RAD2YGR258C 3096 nt3.46□□□□□ -1.86
RSB1Q08417 CWC22YGR278W 1734 nt3.45□□□□□ -1.86
RSB1Q08417 YEL020C-BYEL020C-B 198 nt3.45□□□□□ -1.86
RSB1Q08417 ISD11YER048W-A 285 nt3.45□□□□□ -1.86
RSB1Q08417 RPL14BYHL001W 417 nt3.45□□□□□ -1.86
RSB1Q08417 SOD1YJR104C 465 nt3.45□□□□□ -1.86
Retrieved 100 of 7,029 protein–RNA pairs in 12.1 ms